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Hofmeister, Brigitte T.;Denkena, Johanna;Colomé-Tatché, Maria;Shahryary, Yadollah;Hazarika, Rashmi;Grimwood, Jane;Mamidi, Sujan;Jenkins, Jerry;Grabowski, Paul P.;Sreedasyam, Avinash;Shu, Shengqiang;Barry, Kerrie;Lail, Kathleen;Adam, Catherine;Lipzen, Anna;Sorek, Rotem;Kudrna, Dave;Talag, Jayson;Wing, Rod;Hall, David W.;Jacobsen, Daniel;Tuskan, Gerald A.;Schmutz, Jeremy;Johannes, Frank;Schmitz, Robert J.
A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa
Genome Biology
2020
21
1
Shahryary, Yadollah;Symeonidi, Aikaterini;Hazarika, Rashmi R.;Denkena, Johanna;Mubeen, Talha;Hofmeister, Brigitte;van Gurp, Thomas;Colomé-Tatché, Maria;Verhoeven, Koen;Tuskan, Gerald;Schmitz, Robert J;Johannes, Frank
AlphaBeta: Computational inference of epimutation rates and spectra from high-throughput DNA methylation data in plants
bioRxiv
2020
Wendte, Jered M;Zhang, Yinwen;Ji, Lexiang;Shi, Xiuling;Hazarika, Rashmi R;Shahryary, Yadollah;Johannes, Frank;Schmitz, Robert J
Epimutations are associated with CHROMOMETHYLASE 3-induced de novo DNA methylation
eLife
2019
8
Yao, Nan;Schmitz, Robert J.;Johannes, Frank
Epimutations Define a Fast-Ticking Molecular Clock in Plants
Trends in Genetics
2021
37
8
699-710
Zhang, Yinwen;Jang, Hosung;Xiao, Rui;Kakoulidou, Ioanna;Piecyk, Robert S.;Johannes, Frank;Schmitz, Robert J.
Heterochromatin is a quantitative trait associated with spontaneous epiallele formation
Nature Communications
2021
12
1
Hazarika, Rashmi R.;Serra, Michele;Zhang, Zhilin;Zhang, Yinwen;Schmitz, Robert J.;Johannes, Frank
Molecular properties of epimutation hotspots
Nature Plants
2022
8
2
146-156
Johannes, Frank;Schmitz, Robert J.
Spontaneous epimutations in plants
New Phytologist
2018
221
3
1253-1259
Ji, Lexiang;Jordan, William T.;Shi, Xiuling;Hu, Lulu;He, Chuan;Schmitz, Robert J.
TET-mediated epimutagenesis of the Arabidopsis thaliana methylome
Nature Communications
2018
9
1
Lu, Zefu;Marand, Alexandre P.;Ricci, William A.;Ethridge, Christina L.;Zhang, Xiaoyu;Schmitz, Robert J.
The prevalence, evolution and chromatin signatures of plant regulatory elements
Nature Plants
2019
5
12
1250-1259
Hofmeister, Brigitte T.;Denkena, Johanna;Colomé-Tatché, Maria;Shahryary, Yadollah;Hazarika, Rashmi;Grimwood, Jane;Mamidi, Sujan;Jenkins, Jerry;Grabowski, Paul P.;Sreedasyam, Avinash;Shu, Shengqiang;Barry, Kerrie;Lail, Kathleen;Adam, Catherine;Lipzen, Anna;Sorek, Rotem;Kudrna, Dave;Talag, Jayson;Wing, Rod;Hall, David W.;Tuskan, Gerald A.;Schmutz, Jeremy;Johannes, Frank;Schmitz, Robert J.
The somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa
bioRxiv
2019
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