Yao, Nan;Schmitz, Robert J.;Johannes, Frank
Epimutations Define a Fast-Ticking Molecular Clock in Plants
Trends in Genetics
2021
37
8
699-710

Hazarika, Rashmi R.;Serra, Michele;Zhang, Zhilin;Zhang, Yinwen;Schmitz, Robert J.;Johannes, Frank
Molecular properties of epimutation hotspots
Nature Plants
2022
8
2
146-156

Zhang, Yinwen;Jang, Hosung;Xiao, Rui;Kakoulidou, Ioanna;Piecyk, Robert S.;Johannes, Frank;Schmitz, Robert J.
Heterochromatin is a quantitative trait associated with spontaneous epiallele formation
Nature Communications
2021
12
1

Hofmeister, Brigitte T.;Denkena, Johanna;Colomé-Tatché, Maria;Shahryary, Yadollah;Hazarika, Rashmi;Grimwood, Jane;Mamidi, Sujan;Jenkins, Jerry;Grabowski, Paul P.;Sreedasyam, Avinash;Shu, Shengqiang;Barry, Kerrie;Lail, Kathleen;Adam, Catherine;Lipzen, Anna;Sorek, Rotem;Kudrna, Dave;Talag, Jayson;Wing, Rod;Hall, David W.;Jacobsen, Daniel;Tuskan, Gerald A.;Schmutz, Jeremy;Johannes, Frank;Schmitz, Robert J.
A genome assembly and the somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa
Genome Biology
2020
21
1

Brigitte T. Hofmeister, Johanna Denkena, Maria Colomé-Tatché, Yadollah Shahryary, Rashmi Hazarika, Jane Grimwood, Sujan Mamidi, Jerry Jenkins, Paul P. Grabowski, Avinash Sreedasyam, Shengqiang Shu, Kerrie Barry, Kathleen Lail, Catherine Adam, Anna Lipzen, Rotem Sorek, Dave Kudrna, Jayson Talag, Rod Wing, David W. Hall, Gerald A. Tuskan, Jeremy Schmutz, Frank Johannes, Robert J. Schmitz
The somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa
2019

Hofmeister, Brigitte T.;Denkena, Johanna;Colomé-Tatché, Maria;Shahryary, Yadollah;Hazarika, Rashmi;Grimwood, Jane;Mamidi, Sujan;Jenkins, Jerry;Grabowski, Paul P.;Sreedasyam, Avinash;Shu, Shengqiang;Barry, Kerrie;Lail, Kathleen;Adam, Catherine;Lipzen, Anna;Sorek, Rotem;Kudrna, Dave;Talag, Jayson;Wing, Rod;Hall, David W.;Tuskan, Gerald A.;Schmutz, Jeremy;Johannes, Frank;Schmitz, Robert J.
The somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa
bioRxiv
2019

Shahryary, Yadollah;Symeonidi, Aikaterini;Hazarika, Rashmi R.;Denkena, Johanna;Mubeen, Talha;Hofmeister, Brigitte;van Gurp, Thomas;Colomé-Tatché, Maria;Verhoeven, Koen;Tuskan, Gerald;Schmitz, Robert J;Johannes, Frank
AlphaBeta: Computational inference of epimutation rates and spectra from high-throughput DNA methylation data in plants
bioRxiv
2020

Johannes, Frank;Schmitz, Robert J.
Spontaneous epimutations in plants
New Phytologist
2018
221
3
1253-1259

Lu, Zefu;Marand, Alexandre P.;Ricci, William A.;Ethridge, Christina L.;Zhang, Xiaoyu;Schmitz, Robert J.
The prevalence, evolution and chromatin signatures of plant regulatory elements
Nature Plants
2019
5
12
1250-1259

Wendte, Jered M;Zhang, Yinwen;Ji, Lexiang;Shi, Xiuling;Hazarika, Rashmi R;Shahryary, Yadollah;Johannes, Frank;Schmitz, Robert J
Epimutations are associated with CHROMOMETHYLASE 3-induced de novo DNA methylation
eLife
2019
8