Blumenthal, David B;Lucchetta, Marta;Kleist, Linda;Fekete, Sándor P;List, Markus;Schaefer, Martin H
Emergence of power-law distributions in protein-protein interaction networks through study bias
eLife
2024
13

Kersting, Johannes;Lazareva, Olga;Louadi, Zakaria;Baumbach, Jan;Blumenthal, David B.;List, Markus
DysRegNet: Patient‐specific and confounder‐aware dysregulated network inference towards precision therapeutics
British Journal of Pharmacology
2024

Schmidt, Johannes R;Adamowicz, Klaudia;Arend, Lis;Lehmann, Jörg;List, Markus;Poh, Patrina SP;Baumbach, Jan;Kalkhof, Stefan;Laske, Tanja
Meta-analysis of proteomics data from osteoblasts, bone, and blood: Insights into druggable targets, active factors, and potential biomarkers for bone biomaterial design
Journal of Tissue Engineering
2024
15

Grabert, Gordon;Dehncke, Daniel;More, Tushar;List, Markus;Kraft, Anke R M;Cornberg, Markus;Hiller, Karsten;Kacprowski, Tim
MeTEor - an R Shiny app for Exploring Longitudinal Metabolomics Data
Bioinformatics Advances
2024

Probul, Niklas;Huang, Zihua;Saak, Christina Caroline;Baumbach, Jan;List, Markus
AI in microbiome‐related healthcare
Microbial Biotechnology
2024
17
11

Häcker, Deborah;Siebert, Kolja;Smith, Byron J.;Köhler, Nikolai;Riva, Alessandra;Mahapatra, Aritra;Heimes, Helena;Nie, Jiatong;Metwaly, Amira;Hölz, Hannes;Manz, Quirin;De Zen, Federica;Heetmeyer, Jeannine;Socas, Katharina;Le Thi, Giang;Meng, Chen;Kleigrewe, Karin;Pauling, Josch K.;Neuhaus, Klaus;List, Markus;Pollard, Katherine S.;Schwerd, Tobias;Haller, Dirk
Exclusive enteral nutrition initiates individual protective microbiome changes to induce remission in pediatric Crohn’s disease
Cell Host & Microbe
2024

Hoelz, Hannes;Faro, Tim;Frank, Marie-Luise;Forné, Ignasi;Kugelmann, Daniela;Jurk, Anja;Buehler, Simon;Siebert, Kolja;Matchado, Monica;Straub, Tobias;Hering, Annett;Piontek, Guido;Mueller, Susanna;Koletzko, Sibylle;List, Markus;Steiger, Katja;Rudelius, Martina;Waschke, Jens;Schwerd, Tobias
Persistent desmoglein-1 downregulation and periostin accumulation in histologic remission of eosinophilic esophagitis
Journal of Allergy and Clinical Immunology
2024

Hoffmann, Markus;Poschenrieder, Julian M;Incudini, Massimiliano;Baier, Sylvie;Fritz, Amelie;Maier, Andreas;Hartung, Michael;Hoffmann, Christian;Trummer, Nico;Adamowicz, Klaudia;Picciani, Mario;Scheibling, Evelyn;Harl, Maximilian V;Lesch, Ingmar;Frey, Hunor;Kayser, Simon;Wissenberg, Paul;Schwartz, Leon;Hafner, Leon;Acharya, Aakriti;Hackl, Lena;Grabert, Gordon;Lee, Sung-Gwon;Cho, Gyuhyeok;Cloward, Matthew E;Jankowski, Jakub;Lee, Hye Kyung;Tsoy, Olga;Wenke, Nina;Pedersen, Anders Gorm;Bønnelykke, Klaus;Mandarino, Antonio;Melograna, Federico;Schulz, Laura;Climente-González, Héctor;Wilhelm, Mathias;Iapichino, Luigi;Wienbrandt, Lars;Ellinghaus, David;Van Steen, Kristel;Grossi, Michele;Furth, Priscilla A;Hennighausen, Lothar;Di Pierro, Alessandra;Baumbach, Jan;Kacprowski, Tim;List, Markus;Blumenthal, David B
Network medicine-based epistasis detection in complex diseases: ready for quantum computing
Nucleic Acids Research
2024

Bernett, Judith;Blumenthal, David B.;Grimm, Dominik G.;Haselbeck, Florian;Joeres, Roman;Kalinina, Olga V.;List, Markus
Guiding questions to avoid data leakage in biological machine learning applications
Nature Methods
2024
21
8
1444-1453

Merotto, Lorenzo;Sturm, Gregor;Dietrich, Alexander;List, Markus;Finotello, Francesca
Making mouse transcriptomics deconvolution accessible with immunedeconv
Bioinformatics Advances
2024
4
1