This thesis describes the results of investigating the sequence-structure relationships in messenger RNAs. First, the analysis of experimentally measured probabilities of nucleotides to be paired in yeast mRNAs is presented. Second, a method for analyzing temperature-induced alterations of RNA secondary structure, and its application to study the difference between wild type and cold-adapted, temperature-sensitive influenza viruses, is shown. Based on this method, a web server RNAtips.org was developed. Finally, the analysis of mutations occurring during the E. coli evolution is discussed.
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This thesis describes the results of investigating the sequence-structure relationships in messenger RNAs. First, the analysis of experimentally measured probabilities of nucleotides to be paired in yeast mRNAs is presented. Second, a method for analyzing temperature-induced alterations of RNA secondary structure, and its application to study the difference between wild type and cold-adapted, temperature-sensitive influenza viruses, is shown. Based on this method, a web server RNAtips.org was de...
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