Tröster, Alix;Heinzlmeir, Stephanie;Berger, Benedict-Tilman;Gande, Santosh L.;Saxena, Krishna;Sreeramulu, Sridhar;Linhard, Verena;Nasiri, Amir H.;Bolte, Michael;Müller, Susanne;Kuster, Bernhard;Médard, Guillaume;Kudlinzki, Denis;Schwalbe, Harald
NVP-BHG712: Effects of Regioisomers on the Affinity and Selectivity toward the EPHrin Family
ChemMedChem
2018
13
16
1629-1633

Kindt, Alida;Liebisch, Gerhard;Clavel, Thomas;Haller, Dirk;Hörmannsperger, Gabriele;Yoon, Hongsup;Kolmeder, Daniela;Sigruener, Alexander;Krautbauer, Sabrina;Seeliger, Claudine;Ganzha, Alexandra;Schweizer, Sabine;Morisset, Rosalie;Strowig, Till;Daniel, Hannelore;Helm, Dominic;Küster, Bernhard;Krumsiek, Jan;Ecker, Josef
The gut microbiota promotes hepatic fatty acid desaturation and elongation in mice
Nature Communications
2018
9
1

Deutsch, Eric W.;Perez-Riverol, Yasset;Chalkley, Robert J.;Wilhelm, Mathias;Tate, Stephen;Sachsenberg, Timo;Walzer, Mathias;Käll, Lukas;Delanghe, Bernard;Böcker, Sebastian;Schymanski, Emma L.;Wilmes, Paul;Dorfer, Viktoria;Kuster, Bernhard;Volders, Pieter-Jan;Jehmlich, Nico;Vissers, Johannes P. C.;Wolan, Dennis W.;Wang, Ana Y.;Mendoza, Luis;Shofstahl, Jim;Dowsey, Andrew W.;Griss, Johannes;Salek, Reza M.;Neumann, Steffen;Binz, Pierre-Alain;Lam, Henry;Vizcaíno, Juan Antonio;Bandeira, Nuno;Röst, Hannes
Expanding the Use of Spectral Libraries in Proteomics
Journal of Proteome Research
2018
17
12
4051-4060

Prechtl, Roman M.;Janßen, Dorothee;Behr, Jürgen;Ludwig, Christina;Küster, Bernhard;Vogel, Rudi F.;Jakob, Frank
Sucrose-Induced Proteomic Response and Carbohydrate Utilization of Lactobacillus sakei TMW 1.411 During Dextran Formation
Frontiers in Microbiology
2018
9

Rechenberger, Julia;Samaras, Patroklos;Jarzab, Anna;Behr, Juergen;Frejno, Martin;Djukovic, Ana;Sanz, Jaime;González-Barberá, Eva M.;Salavert, Miguel;López-Hontangas, Jose Luis;Xavier, Karina B.;Debrauwer, Laurent;Rolain, Jean-Marc;Sanz, Miguel;Garcia-Garcera, Marc;Wilhelm, Mathias;Ubeda, Carles;Kuster, Bernhard
Challenges in Clinical Metaproteomics Highlighted by the Analysis of Acute Leukemia Patients with Gut Colonization by Multidrug-Resistant Enterobacteriaceae
Proteomes
2019
7
1
2

Wang, Dongxue;Eraslan, Basak;Wieland, Thomas;Hallström, Björn;Hopf, Thomas;Zolg, Daniel Paul;Zecha, Jana;Asplund, Anna;Li, Li‐hua;Meng, Chen;Frejno, Martin;Schmidt, Tobias;Schnatbaum, Karsten;Wilhelm, Mathias;Ponten, Frederik;Uhlen, Mathias;Gagneur, Julien;Hahne, Hannes;Kuster, Bernhard
A deep proteome and transcriptome abundance atlas of 29 healthy human tissues
Molecular Systems Biology
2019
15
2

Eraslan, Basak;Wang, Dongxue;Gusic, Mirjana;Prokisch, Holger;Hallström, Björn M;Uhlén, Mathias;Asplund, Anna;Pontén, Frederik;Wieland, Thomas;Hopf, Thomas;Hahne, Hannes;Kuster, Bernhard;Gagneur, Julien
Quantification and discovery of sequence determinants of protein‐per‐mRNA amount in 29 human tissues
Molecular Systems Biology
2019
15
2

Gessulat, Siegfried;Schmidt, Tobias;Zolg, Daniel Paul;Samaras, Patroklos;Schnatbaum, Karsten;Zerweck, Johannes;Knaute, Tobias;Rechenberger, Julia;Delanghe, Bernard;Huhmer, Andreas;Reimer, Ulf;Ehrlich, Hans-Christian;Aiche, Stephan;Kuster, Bernhard;Wilhelm, Mathias
Prosit: proteome-wide prediction of peptide tandem mass spectra by deep learning
Nature Methods
2019
16
6
509-518

Seefried, Florian;Schmidt, Tobias;Reinecke, Maria;Heinzlmeir, Stephanie;Kuster, Bernhard;Wilhelm, Mathias
CiRCus: A Framework to Enable Classification of Complex High-Throughput Experiments
Journal of Proteome Research
2019
18
4
1486-1493

Reinecke, Maria;Ruprecht, Benjamin;Poser, Sandra;Wiechmann, Svenja;Wilhelm, Mathias;Heinzlmeir, Stephanie;Kuster, Bernhard;Médard, Guillaume
Chemoproteomic Selectivity Profiling of PIKK and PI3K Kinase Inhibitors
ACS Chemical Biology
2019
14
4
655-664