In this thesis two projects were undertaken: structural and dynamic investigations on green fluorescent-like proteins and the X-ray structure determination of the N-terminal domain of the adenylyl cyclase associated protein (CAP) from Dictyostelium discoideum. 1H-15N NMR spectra of the His148Gly mutant of green fluorescent protein (GFP) indicate that the mutation affects the conformational stability of GFP, we detected two conformations of the protein in a slow exchange on the NMR time scale. Also the 19F NMR studies of variants of GFP and CFP (cyan fluorescent protein) labeled with fluorinated tryptophans, supported by temperature-, concentration- and folding-dependent experiments provided direct evidence for the existence of a slow exchange process between two different conformational states of CFP. The structure of the red fluorescent protein (DsRed) is also described with the emphasis on the conformational properties of the chromophore. DsRed, a 28-kDa polypeptide, displays two new properties of the fluorescent protein family: dramatically red-shifted spectra and oligomerization to form tetramers. DsRed also shows slow kinetics of maturation proceding via a GFP - like green intermediate to the final red species. Structural investigations on the N-terminal domain of CAP (CAP-N) from D. discoideum yielded the crystal structure of this protein. The crystal structure of CAP-N was determined by a combination of single isomorphous replacement with anomalous scattering (SIRAS) of iridium-soaked crystals. The overall structure consists of an a-helix bundle composed of six antiparallel helices. The N-terminal domain of the D. discoideum CAP is found in monomeric and dimeric states. The dimer is formed by an Mg2+ ion and the orientation of the two bundles, together with gel filtration and cross-linking experiments, suggests an overall model for an octameric state of the whole CAP molecule. The presented structure is the first for an N-terminal domain of any CAP and plays a crucial role in the understanding of specific functions for these domains.
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In this thesis two projects were undertaken: structural and dynamic investigations on green fluorescent-like proteins and the X-ray structure determination of the N-terminal domain of the adenylyl cyclase associated protein (CAP) from Dictyostelium discoideum. 1H-15N NMR spectra of the His148Gly mutant of green fluorescent protein (GFP) indicate that the mutation affects the conformational stability of GFP, we detected two conformations of the protein in a slow exchange on the NMR time scale. Al...
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