Benchmarking MicrobIEM - a user-friendly tool for decontamination of microbiome sequencing data

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Title:: Benchmarking MicrobIEM - a user-friendly tool for decontamination of microbiome sequencing data
Document type:: Zeitschriftenaufsatz
Author(s):: Hülpüsch, Claudia ; Rauer, Luise ; Nussbaumer, Thomas ; Schwierzeck, Vera ; Bhattacharyya, Madhumita ; Erhart, Veronika ; Traidl-Hoffmann, Claudia ; Reiger, Matthias ; Neumann, Avidan U.
Keywords:: Research Article ; Low-biomass microbiome ; 16S rRNA gene sequencing ; Bioinformatic decontamination ; Negative control ; Youden's index ; Decontam ; SourceTracker
Journal title:: BMC Biology
Year:: 2023
Journal volume:: 21
Journal issue:: 1
Fulltext / DOI:: doi:10.1186/s12915-023-01737-5
Publisher:: BioMed Central
E-ISSN:: 1741-7007
Date of publication:: 23.11.2023
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