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- Titel:
Experimental data and software for simulation in publication: Mechanical forces instruct division plane orientation of cambium stem cells during radial growth in Arabidopsis thaliana
- Dokumenttyp:
- Forschungsdaten
- Veröffentlichungsdatum:
- 11.10.2024
- Verantwortlich:
- Karen, Alim
- Autorinnen / Autoren:
- Höfler, Mathias; Liu, Xiaomin; Greb, Thomas; Alim, Karen
- Institutionszugehörigkeit:
- Technical University of Munich: Höfler, Mathias; Alim, Karen
Center for Organismal Studies, Heidelberg University, Germany: Liu, Xiaomin; Greb, Thomas - Herausgeber:
- TUM
- Identifikator:
- doi:10.14459/2024mp1741765
- Enddatum der Datenerzeugung:
- 02.05.2024
- Fachgebiet:
- BIO Biowissenschaften; PHY Physik
- Quellen der Daten:
- Experimente und Beobachtungen / experiments and observations; Simulationen / simulations
- Andere Quellen der Daten:
- Software and applications
- Datentyp:
- mehrdimensionale Visualisierungen oder Modelle / models; Tabellen / tables; Programme und Anwendungen / software and applications
- Methode der Datenerhebung:
- Experimental data: Experimental data was obtained by means of confocal microscopy (Nikon A1 confocal microscope with 25x water immersion objective and Leica Stellaris 8 confocal microscope with 20x air objective and 63x water objective) and data was analyzed, using the softwares PlantSeg, MorphographX and FIJI
Simulation data: The code was written both in MacOSX and Ubuntu, using the IDEs Eclipse and Visual Studio Code. The simulation executables were compiled in both MacOSX and Ubuntu using g+... » - Beschreibung:
- The experimental data comprises raw images of biological samples as well as raw data extracted from these.
The simulation software contains the sourcecode used to produce simulation results of this work. It consists of our C++ code of the core functionalities, including scripts used for generating the data in the publication and a simple example of how to build a simple growth simulation. Therein we also have a README file, detailling about requirements and compilation. - Links:
- This dataset relates to the publication: https://doi.org/10.1016/j.cub.2024.10.046
- Schlagworte:
- Plant development; cell growth; cell division; mechanical stress
- Technische Hinweise:
- View and download (2,47 GB total, 219 Files)
The data server also offers downloads with FTP
The data server also offers downloads with rsync (password m1741765):
rsync rsync://m1741765@dataserv.ub.tum.de/m1741765/ - Sprache:
- de
- Andere Rechte:
- MIT License (refer to "LICENSE" file in the datasheet)
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