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Autor(en):
Andre Dau; Johannes Krugel 
Titel:
tt-analyze and tt-generate: Tools to Analyze and Generate Sequences with Trained Statistical Properties 
Abstract:
Algorithms working on sequences are influenced by the statistical properties of the sequences. Algorithms for fragment assembly for example usually produce a worse result if there are many repetitions. Also the space usage and running time of many data structures and algorithms depend on the statistical properties of the underlying text. We implemented tt-analyze, a tool to analyze sequences for certain statistical properties, among others the entropy, the number and distribution of differe...    »
 
Stichworte:
models; genome analysis; efficient sequence analysis; efficient algorithms; machine learning; Markov process 
Jahr:
2011 
Sprache:
en